Skip to content

Structure Viewer

Structure Viewer draws the selected crystal as a three-dimensional image using OpenGL.

Structure Viewer


Main area

3D crystal structure with light source, crystal axes, and atom legend.

Operation Action
Left drag Rotate
Centre drag Translate
Right drag/wheel Zoom
Left double-click Select/deselect atom
Ctrl+Right double-click Toggle perspective/orthogonal

Menu bar

The Size (W×H) box at the top right of the window sets the pixel size used when saving or copying the rendered image.

File menu

Save image, copy to clipboard (Ctrl+Shift+C), save movie (MP4).

Save movie opens the Movie setting dialog below: set the rotation speed, recording duration, and direction (current projection, a direction index, or a lattice plane), the codec (H.264 / H.265) and encode speed, then press OK to generate an MP4 file.

Movie setting dialog

Tool menu


Tab menu

Bounds

Bounds tab

Drawing range by unit cell or crystal planes. Bound planes, clipping, hide atoms.

Atoms

Atoms tab

Coordinates, element, occupancy, radius, colour, material. Apply to same elements.

Bonds & Polyhedra

Bonds tab

Bond length thresholds, polyhedron display, edges.

Unit Cell

Unit Cell tab

Translation, cell planes, edges.

Lattice Planes

Lattice Plane tab

Miller index specification with crystallographic equivalents.

Coordination

Coordinates tab

Coordination table and graph around target atom.

Information

Information tab

Performance log and atom information.

Projection

Projection tab

Projection mode (orthographic/perspective), depth fading, rendering quality, transparency mode.

Misc.

Misc tab

Accessory panel size, label settings, bonded atoms outside boundaries.

Symmetry Elements

The Symmetry Elements tab draws the space-group symmetry operators directly onto the 3D model (toggle with the Symmetry Elements toolbar button). Each class of element can be shown/hidden independently:

  • Rotation axes and screw axes
  • Mirror planes and glide planes
  • Inversion centres and rotoinversion axes

For each class you can adjust the symbol size, line width, and colour.


Toolbar

Toolbar

Button Description
Crystal Axes Show axis orientation (size = lattice constant)
Light direction Set light direction
Legend Atom legend
Like Vesta Vesta-style appearance
Reset rotation Return to the initial orientation
Atom / Label Toggle atom objects / atom labels
Unit cell Toggle unit-cell edges
Symmetry Elements Toggle the symmetry-element overlay (see above)